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Samson Weiner and Mukul S. Bansal
Duplication-Transfer-Loss (DTL) reconciliation is a widely used computational technique for understanding gene family evolution and inferring horizontal gene transfer (transfer for short) in microbes. However, most existing models and implementations of ...
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Ashley I. Teufel, Jing Zhao, Malgorzata O'Reilly, Liang Liu and David A. Liberles
Characterizing the mechanisms of duplicate gene retention using phylogenetic methods requires models that are consistent with different biological processes. The interplay between complex biological processes and necessarily simpler statistical models le...
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Biao Liu, Wei Chen, Zhen Wang, Zhaohui Guo, Yongmei Li, Lijuan Xu, Minxi Wu and Hongmei Yin
Nitrogen loss is an unavoidable problem during organic waste composting, while exogenous microbial inoculation is a promising strategy for reducing nitrogen loss and improving compost quality. This study was designed to probe available nitrogen levels, b...
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Xiaodong Wang, Yuhang Guo, Yiru Wang, Yunling Peng, Hongwei Zhang and Jun Zheng
Drought stress presents a significant threat to the growth and development of maize. It is important to study the genes and mechanisms that contribute to drought tolerance. In this study, we identified ZmHDT103 (that encodes a histone deacetylase) by con...
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Lichao Sun, Yunyun Dong, Shuang Xu, Xiufang Feng and Xiaole Fan
Epidermal growth factor receptor (EGFR) and Kirsten rat sarcoma (KRAS) are the most common driver genes in non-small cell lung cancer patients. However, frequent gene mutation testing raises a potential risk of cancer metastasis. In our paper, a Mut-SeRe...
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Song Zhang, Chong Chen, Shanshan Dai, Minmin Yang, Qingwei Meng, Wei Lv and Nana Ma
Intramembrane proteases play very important roles in plants, such as chloroplast development, flower morphology, and response to abiotic stress. In this study, a putative metalloprotease gene, homologous to Ethylene-dependent Gravitropism deficient and Y...
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Jun Song, Brooke Pallas, Dongshan Yang, Jifeng Zhang, Yash Agarwal, Y. Eugene Chen, Moses Bility and Jie Xu
Production of immunodeficient (ID) models in non-murine animal species had been extremely challenging until the advent of gene-editing tools: first zinc finger nuclease (ZFN), then transcription activator-like effector nuclease (TALEN), and most recently...
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Leena Thorat, Bimalendu B. Nath
Desiccating environments pose physiological challenges to organisms, especially those experiencing them on recurring basis. Several desiccation-tolerant organisms are known to withstand loss of body water in response to seasonal dehydration patterns thro...
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Hang Ye, Hengzhao Liu, Mian Han, Naiyu Zhang, Xiaolong Feng, Ting Gao, Dingfan Lei, Haochen Li, Zhimei Gao, Yu Su, Min Chai, Huijuan Zhou and Yiling Wang
Plant NAPDH oxidase (NOX) gene family members are critical producers of ROS and play crucial roles in plant signaling, development, and stress responses. Opisthopappus taihangensis is a pivotal wild genetic resource in Asteraceae. To date, little knowled...
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Sara Rajaram and Cassie S. Mitchell
The ability to translate Generative Adversarial Networks (GANs) and Variational Autoencoders (VAEs) into different modalities and data types is essential to improve Deep Learning (DL) for predictive medicine. This work presents DACMVA, a novel framework ...
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Shouqiang Zhao, Zhongyang Li, Chuncheng Liu, Jiuming Sun, Jibin Song, Xiaotong Li and Yuan Liu
To investigate the effects of different manures in combination with fulvic acid on the abundance of N-cycling functional genes in greenhouse soils, Chinese cabbage was planted for three growing seasons. A total of six treatments?pig manure (P), pig manur...
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Narjes J. Alamer, Munirah F. Aldayel and Ashraf Khalifa
Plastic pollution is one of the most serious environmental issues, causing severe environmental damage. It is of vital importance to find an efficient and eco-friendly approach to biodegrading plastics. The aim of this study was to isolate and characteri...
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Davey L. Jones, Jasmine M. S. Grimsley, Jessica L. Kevill, Rachel Williams, Cameron Pellett, Kathryn Lambert-Slosarska, Andrew C. Singer, Gwion B. Williams, Rafael Bargiela, Robert W. Brown, Matthew J. Wade and Kata Farkas
During the COVID-19 pandemic, wastewater-based epidemiology (WBE) has proven to be an effective tool for monitoring the prevalence of SARS-CoV-2 in urban communities. However, low-cost, simple, and reliable wastewater sampling techniques are still needed...
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Chuxia Zhu, Lingdi Xiao, Yaqi Hu, Liu Liu, Haoju Liu, Zhaoyang Hu, Shiqiang Liu and Yong Zhou
As a class of zinc finger transcription factors, B-box (BBX) proteins play diverse roles in numerous biological processes, and they have been identified in a series of plant species in recent years. However, the roles of BBX genes in regulating cucumber ...
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Chryssa Anastasiadou, Roman Liasko, Athanasios A. Kallianiotis and Ioannis Leonardos
Geometric morphometry has been widely used in decapods? studies for taxonomic needs, and for eco-morphological adaptation and intraspecific variations recordings. Among the 40 species of the genus Hippolyte, the Mediterranean endemic Hippolyte sapphica i...
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Ali Rashid Niaghi, Oveis Hassanijalilian and Jalal Shiri
Evapotranspiration (ET) is widely employed to measure amounts of total water loss between land and atmosphere due to its major contribution to water balance on both regional and global scales. Considering challenges to quantifying nonlinear ET processes,...
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Van-Ngoc Pham, Erwin Oh and Dominic E. L. Ong
The study aims to develop a reliable model using gene-expression programming (GEP) technique for estimating the unconfined compressive strength (UCS) of soil stabilization by cement and fly ash. The model considered the effects of several parameters, inc...
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Keren Yanuka-Golub, Leah Reshef, Judith Rishpon and Uri Gophna
Microbial fuel cells (MFCs) can generate electricity simultaneously with wastewater treatment. For MFCs to be considered a cost-effective treatment technology, they should quickly re-establish a stable electroactive microbial community in the case of sys...
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Tímea Pintér, Miklós Geiszt, Gábor L. Petheo, Máté Mihálffy, Gabriella Skoda, Nándor Lipták, Andrea Kerekes, Zsuzsanna Bosze, László Hiripi and Lilla Bodrogi
Nonrodent animal models have recently become more valuable in preclinical studies. The limitation of nonrodent animal models is that they must demonstrate relatively reliable and predictable responses in addition to representing complex etiologies of a g...
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Ievgen Fedorchenko,Andrii Oliinyk,Alexander Stepanenko,Tetiana Zaiko,Serhii Korniienko,Anastasiia Kharchenko
Pág. 52 - 63
A genetic method has been proposed to forecast the health indicators of population based on neural-network models. The fundamental difference of the proposed genetic method from existing analogs is the use of the diploid set of chromosomes in individuals...
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